Friday, July 18, 2014

Bias vs Prejudice, 1


Speaking of conflict, the word bias can be defined as a mental tendency or inclination, or a preference that inhibits impartial judgment. Studies suggest that the human brain has a built-in bias for being more comfortable around whatever is familiar, like it. Some say the fastest judgment a brain ever makes when it first sees someone or something is: “This is like me, this is familiar,” or “This is not like me, this is unfamiliar.” When I meet another human being for the first time, my brain instantly catalogs a myriad of comparisons, whether that person is:

·           Like me (female) or different (male)
·           Short like me or tall
·           Of European ancestry like me or not
·           Wearing similar clothing to me or not
·           And so on and so on…

Prejudice is a separate concept from bias. Part 2 next week.

Thursday, July 17, 2014

DNA Ancestry, 7



Based on DNA testing, my patrilineal ancestry reportedly goes back to one African male known as “Y-Chromosomal Adam.” Two initial descendants from this male were the Haplogroup A and the Haplogroup BR. Other mutations occurred that were split into Haplogroup F, Haplogroup P, and eventually Haplogroup R (distinguishable by its M207 mutation). And the Y-chromosome results are aligned with a section of this group known as Haplogroup R1b, reportedly related to a man in Iberia (modern day Spain) now known as ‘the Patriarch, who carried the genetic marker that designates the Haplogroup R1b. My cousin Tim is seeing what he can find about my father’s generational line, because it appears they came to Canada from either Ireland (100% of the male population in Western Ireland belongs to Haplogroup R1b) or from England (70% of the male population in southern Britain belongs to Haplogroup R1b). Anyway, if we could go back far enough, it appears that all of us are related to all of us. Interesting concept, especially in light of all the existing conflicts, locally and globally.

Wednesday, July 16, 2014

DNA Ancestry, 6


I told my one-and-only brother about my venture into DNA testing for maternal mitochondria, and he graciously agreed to send in some of his white blood cells so we could find out more about the Y-chromosomes of our ancestors. On my father’s side, the markers show alignment with Haplogroup R1b, a Western European lineage that is now the most prevalent Haplogroup worldwide. Although the Y-chromosome is much smaller than the X-Chromosome, there are more markers from the Y-chromosome ancestry test. Go figure! I’ll list those number below, too. Part 7 tomorrow.


Region
Marker
DYS 391
11
DYS 3891
12
DYS 439
11
DYS 38911
28
DYS 438
16
DYS 437
15
DYS 19
14
DYS 392
13
DYS 393
13
DYS 390
23
DYS 385
12,14

Tuesday, July 15, 2014

DNA Ancestry, 5

According to DNASolutions Pty. Ltd., my common female ancestor is known as Mitochondrial Eve. Four initial groups of descendants known as Haplogroups Lo-L3 are related to Mitochondrial Eve. Group Lo apparently is now extinct, but Group L-3 divided into two subtypes: M and N. A DNA marker at position 10875T of my mitochondrial DNA, shows that I am a descendent of Haplogroup N. Of course, there were more branchings and a woman classified as “Helena” (meaning light in Greek) marked the beginning of my mitochondrial type: Haplogroup H. One of the most famous of my Haplogroup H ancestors (that can be traced back to Bertha Von Putelendorf who died 1190) is reported to be the French queen Marie Antoinette—who, unfortunately, “lost her head.” Because that family was quite prolific, some others in Haplogroup H include Marie-Louise of Austria (Napoleon’s wife), the Empress Alexandra Fyodorovna (wife of the last Russian tsar Nicolas II), and Britain’s Queen Victoria. Part 6 tomorrow.

Monday, July 14, 2014

DNA Ancestry, 4

Unlike chromosomal DNA that is inherited from both parents, you get all your mitochondrial DNA from your mother. Mutations accumulate in mitochondrial DNA more quickly than in chromosomal DNA, so it's possible to trace your maternal ancestry way back beyond any relatives you may know by name—simply by tracking the inheritance of mutations in mitochondrial DNA. Back to where I started a few days ago: I decided to bite the bullet and send in some of my white blood cells to be analyzed for mitochondrial DNA. In due time the results came back. Apparently the markers that DNA Solutions identified show  I am part of “Haplogroup H,” the most common Haplogroup in Europe, occurring in 40%-60^ of the population. I’ll list my numbers below just in case I may be related to some of you. Part 5 tomorrow.

Marker
16519C
152C
263G
315.1C

Friday, July 11, 2014

DNA Ancestry, 3

A mutation is a change in the spelling of a DNA sequence (think of your body having a spell-check for DNA sequences and that for some reason or other, it fails). Your DNA contains mutations that typically are quite harmless. Some, however, are harmful and may be responsible for triggering abnormal conditions and specific diseases. For example, sickle cell anemia can be caused by a change in one single gene! Although 99% of your DNA is located in your chromosomes, the remaining 1% of your DNA is located in the mitochondria. The mitochondria in human cells are the energy factories that produce the energy-rich molecule known as ATP or adenosine triphosphate. Scientists are linking mitochondrial DNA defects with a wide range of age-related diseases including neurodegenerative disorders, some forms of heart disease, diabetes, and various cancers. Part 4 next week.

Thursday, July 10, 2014

DNA Ancestry, 2

According to Dr. John Stamatoyannopoulos, University of Washington, associate professor of genome sciences and of medicine, for over forty years it has been assumed that DNA changes affecting the genetic code solely impacted how proteins were made—now it appears that this basic assumption about reading the human genome missed half of the picture. New findings highlight that DNA is an incredibly powerful information storage device, which nature has fully exploited in unexpected ways. About 15% of the 64-letter (codon) alphabet are dual-use letters known as duons. They simultaneously specify both amino acids and something called transcription factor (TF) sequences. This means that many DNA changes that appear to alter protein sequences may actually cause disease by disrupting gene control programs or even both mechanisms simultaneously. Part 3 tomorrow.